San Diego well permit

Well Permit Guide San Diego County: Requirements & Process

Updated February 2026 | By Southern California Well Service

Quick Answer: San Diego County requires permits for drilling, modifying, or abandoning wells. Apply through County DEH (Environmental Health). Permit cost: $200-$600. Timeline: 2-4 weeks typical. Requirements: property ownership, site plan, setback compliance, and licensed contractor. We can help navigate the process.

Types of Well Permits

New Well Permit

  • Required for drilling new water well
  • Most extensive application
  • Requires site plan and setback verification
  • Environmental review may be required

Repair/Modification Permit

  • For pump replacement, deepening, or rehabilitation
  • Simpler application process
  • Lower fees
  • Faster approval

Abandonment Permit

  • Required for properly sealing unused wells
  • Documents proper closure
  • Protects from future liability

Inactive Well Registration

  • For wells not currently in use but not abandoned
  • Must maintain in safe condition
  • Annual registration may be required

Permit Requirements

Documentation Needed

  • ☐ Completed permit application
  • ☐ Property ownership verification
  • ☐ Site plan showing well location
  • ☐ Setback distances from septic, property lines
  • ☐ Licensed contractor information (C-57)
  • ☐ Proof of water rights (if applicable)
  • ☐ Environmental clearances (if required)

Site Plan Requirements

  • Property boundaries
  • Proposed well location
  • Distance to septic tank and leach field
  • Distance to property lines
  • Existing structures
  • Any existing wells

Contractor Requirements

  • Valid C-57 Water Well Contractor license
  • Current insurance
  • Workers compensation (if applicable)

Application Process

Step 1: Pre-Application

  • Verify site can meet setback requirements
  • Check for special district requirements
  • Contact County DEH with questions
  • Gather required documentation

Step 2: Submit Application

  • Complete application form
  • Include all required documents
  • Pay application fee
  • Submit to County DEH

Step 3: Review

  • County reviews for completeness
  • Verifies setback compliance
  • Checks for environmental concerns
  • May request additional information

Step 4: Approval

  • Permit issued with conditions
  • Valid for specified period (usually 1 year)
  • Must begin work within timeframe

Step 5: Construction & Completion

  • Notify county before starting
  • Follow permit conditions
  • Submit completion report
  • Water test may be required

Contact Information

San Diego County DEH - Land and Water Quality Division

  • Phone: (858) 565-5100
  • Address: 5500 Overland Ave, San Diego, CA 92123
  • Website: sdcounty.ca.gov/deh

Costs & Timeline

Permit Fees (Approximate)

Permit Type Fee Range
New domestic well $400-$600
Repair/modification $200-$400
Abandonment $150-$300
Environmental review (if required) Additional fees

Note: Fees subject to change. Contact County DEH for current fee schedule.

Timeline

Situation Typical Timeline
Simple repair permit 1-2 weeks
Standard new well permit 2-4 weeks
Complex project/environmental review 2-3+ months

Factors Affecting Timeline

  • Completeness of application
  • Setback compliance issues
  • Environmental concerns
  • Water district requirements
  • County workload

Setback Requirements

Minimum Distances

From Minimum Distance
Septic tank 50 feet
Leach field/disposal area 100 feet
Property line 5 feet (varies)
Buildings 5 feet
Sewer lines 50 feet

Note: These are general guidelines. Specific requirements may vary. Verify with county.

Variance Process

If setbacks cannot be met:

  • Variance may be possible in some cases
  • Additional review required
  • May require special construction methods
  • Higher fees and longer timeline

Tips for Smooth Approval

Before Applying

  • Verify setback compliance before submitting
  • Have licensed contractor review site
  • Check for any special district requirements
  • Call county with questions first

Application Tips

  • Complete all fields on application
  • Include clear, accurate site plan
  • Show all measurements to scale
  • Provide contractor license number
  • Submit all required documents together

Working with Contractor

  • Many contractors handle permit process
  • Experience with local requirements helps
  • Ask about permit timeline

Frequently Asked Questions

How much does a well permit cost in San Diego County?

$200-$600 depending on permit type. New domestic well permits are typically $400-$600.

How long does it take to get a well permit?

2-4 weeks for standard permits. Complex projects may take 2-3 months.

Do I need a permit to replace my well pump?

Generally yes, a repair permit is required for pump replacement in San Diego County.

Can I drill a well anywhere on my property?

No—you must meet setback requirements from septic systems, property lines, etc.

What if my property can't meet setback requirements?

You may apply for a variance, but approval isn't guaranteed. Consult with county before purchasing property.

Do you handle the permit process?

Yes! We handle permit applications for well drilling and repairs. We know San Diego County requirements well.

Need Help with Well Permits?

See our well drilling services - we handle permits.