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Maintenance

Preventing Well Contamination

Complete Protection Guide for Your Water Supply

SC

By SCWS Team

Published February 17, 2026 · 12 min read

Unlike public water systems, no one is testing or protecting your private well except you. Contamination can happen gradually or suddenly, from sources you control and sources you can't. Understanding the threats—and how to prevent them—is essential for safe drinking water.

Common Contamination Sources

On Your Property

  • Septic systems: #1 source of bacteria contamination in private wells
  • Fuel storage: Underground tanks can leak; above-ground tanks can spill
  • Fertilizers & pesticides: Can leach through soil to groundwater
  • Animal waste: Horses, chickens, dogs near wellhead
  • Old wells: Improperly abandoned wells create contamination pathways
  • Vehicle maintenance: Oil, antifreeze, solvents

Neighboring Properties

  • Agricultural operations: Fertilizers, pesticides, animal waste
  • Industrial sites: Chemical storage and disposal
  • Gas stations: Underground storage tanks
  • Neighbors' septic systems: Especially if uphill from your well
  • Road runoff: Salt, oil, chemicals from paved surfaces

Natural Sources

  • Arsenic: Naturally present in certain California geology
  • Uranium & radon: From radioactive minerals in rock
  • Nitrates: Can be natural or from agriculture
  • Iron & manganese: Naturally occurring; not health hazards but nuisances
  • Bacteria: Can be natural or from contamination

Setback Distance Requirements

Potential Contamination SourceMinimum Distance from Well
Septic tank50-100 feet (varies by county)
Septic leach field100-150 feet
Underground fuel tank100 feet minimum
Livestock/animal areas100 feet
Fertilizer/pesticide storage100 feet
Property boundary5-10 feet (varies)
Surface water bodies50-100 feet

Wellhead Protection

✓ Wellhead Protection Checklist

  • Secure well cap: Vermin-proof, properly sealed
  • Sanitary seal: Intact where pipes/wires enter
  • Proper grading: Surface slopes away from well
  • 12" casing height: Extends above ground level
  • No debris: Keep vegetation and mulch away from casing
  • Protective bollards: Prevent vehicle damage if near driveway
  • Clear zone: No pesticides, fertilizers, chemicals within 100 feet

Septic System Management

Your septic system is probably the biggest contamination threat you control:

  • Pump regularly: Every 3-5 years for typical household use
  • Don't overload: Spread laundry loads; fix leaky fixtures
  • Avoid harmful inputs: No grease, chemicals, excessive antibacterials
  • Inspect annually: Catch problems before they reach groundwater
  • Know the location: Don't park or build over leach field
  • Watch for signs: Slow drains, wet spots, odors indicate problems

Chemical & Fuel Management

  • Store away from well: 100+ feet for any hazardous materials
  • Secondary containment: Place fuel containers in catch basins
  • Dispose properly: Never dump chemicals, oil, or pesticides on ground
  • Use carefully: Mix pesticides/herbicides away from well area
  • Inspect tanks: Check for leaks on any fuel storage

Flood and Storm Protection

  • Before storms: Verify cap and seal are secure
  • During flooding: Don't use well if water covers wellhead
  • After flooding: Assume contamination; disinfect before use
  • Inspect damage: Check all components after severe weather
  • Test water: Always test after flooding events

See our complete flood disinfection guide for emergency procedures.

Water Testing Program

Regular testing catches problems early:

  • Bacteria: Test annually (minimum)
  • Nitrates: Annually if near agriculture or septic
  • Comprehensive panel: Every 3-5 years
  • After incidents: Test after flooding, nearby contamination events, or water quality changes

Frequently Asked Questions

What can contaminate a private well?

Common sources include septic systems, agricultural runoff, surface water infiltration, naturally occurring contaminants (arsenic, radon), fuel tanks, chemical storage, flooding, and improperly abandoned wells.

How far should a well be from a septic system?

California requires minimum 50 feet from septic tanks, 100 feet from leach fields. Some counties require more. San Diego County requires 100 feet from any septic component.

What are signs my well may be contaminated?

Warning signs include taste/odor/color changes, cloudiness, fixture staining, digestive illness, and positive bacteria tests. However, many contaminants have no visible signs—testing is essential.

Need Help Protecting Your Well?

Southern California Well Service provides inspection, maintenance, and water quality services throughout San Diego and Riverside Counties.

Call (760) 463-0493

Related Guides

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